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Improving Depth of Field:
BERCOVICI, HADLEY,  &  VILLANUEVA-AMADOZ

Plain-Language &
Multilingual  Abstracts

Abstract

Introduction

Reconstructing Depth of Field by Software Processing

Results and Examples

Other Related Techniques

Conclusions

Acknowledgments

References

 

 

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RESULTS AND EXAMPLES

As illustrations of the results obtained by the use of depth of field reconstruction on actual palynomorphs, pictures depicting selected specimens from two different palynofloras are presented. The first palynoflora is the latest Cretaceous (Maastrichtian) Hell Creek flora from southwestern North Dakota, USA. Abundant literature on the description of the palynological assemblage and species exists (Funkhouser and Evitt 1959; Stanley 1965; Leffingwell 1971; Tschudy 1971; Jarzen 1977; Sweet 1986; Jerzykiewicz and Sweet 1986; Hotton 1988; Srivastava 1994; Sweet and Braman 2001) and are summarized in the work of Nichols (2002) and Nichols and Johnson (2002). This particular flora is located within the northern Aquilapollenites biogeographical domain (Herngreen and Chlonova 1981), with the occurrence of easily recognizable pollen grains of the triprojectate complex. The second palynoflora used is the mid-Cretaceous (Albian - Cenomanian) palynoflora of the region of Teruel, northeastern Spain. Also, references on these palynological assemblages can be consulted for the original descriptions (Menéndez Amor and Esteras Lartín 1964; Médus 1970; Cabanés and Solé de Porta 1986; Querol and Solé de Porta 1989; Solé de Porta et al. 1994; Solé de Porta and Salas 1994; Peyrot et al. 2005, 2007a, 2007b). This palynoflora corresponds to the Cerebropollenites biogeographical domain. However, there is a significant influence of the Northern Gondwana Province (Elaterate biogeographical domain) as well.

These palynofloras display a great diversity of morphological types with excellent preservation quality, which makes them ideal candidates to evaluate the performance of depth of field reconstruction for each case. Each palynomorph is depicted on a series of pictures representing the individual optical sections used for reconstruction from bottom to top. The reconstructions are shown at the end of the sequence as well and commented below.

Example of Figure 3 and Figure 4 shows two triprojectate pollen grains (Aquilapollenites quadricretaeus and Aquilapollenites attenuatus) from the Hell Creek flora. The very complex three-dimensional structure makes them spectacular and convincing candidates for depth of field correction. Using the "Do Stack" macro efficiently combines all of the frames into a single comprehensive image preserving all the details and ornamentation of the exine.

Depending on the mounting medium used for preparing the palynological slides, palynomorphs can more or less frequently be situated in an unfavorable position, not lying flat in the plane perpendicular to the optical axis. For example, Figure 5 (Nyssapollenites spp.) shows that the use of depth of field reconstruction is very efficient in compensating for this problem.

Palynomorphs with very developed external sculptures also benefit from depth of field reconstruction. Four examples are given, 1) Erdtmanipollis cretaceus (Figure 6) with a wellpronounced crotonoid sculpture, 2) Retitriletes spp. (Figure 7) with a reticulate scultpure, 3) Wodehouseia spinata (Figure 8) with echinate sculpture, and 4) Aequitriradites spp. (Figure 9) with reticulate-spinulose sculpture. More care should be taken in the selection of input frames for processing. Variable results can be obtained when patterns tend to overlap. The use of only a limited number of optical sections may help.

 

   

Figure 10, Figure 11, Figure 12, and Figure 13 depict a series of palynomorphs with a different structure between the proximal and distal poles. Here, the "Do Weighted Average" macro was tested on all optical sections. As can be seen, it is not now possible to distinguish ornamentation that occurs on the proximal pole from that occurring on the distal pole. Separating the input images into two sets may be necessary to describe some palynomorphs fully without presenting a false image of everything stacked in a single plane.

   
       


 

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Improving Depth of Field
Plain-Language & Multilingual  Abstracts | Abstract | Introduction | Reconstructing Depth of Field by Software Processing
Results and Examples | Other Related Techniques | Conclusions | Acknowledgments | References
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